speciesLink: rich data and novel tools for digital assessments of biodiversity / speciesLink: dados valiosos e ferramentas inovadoras para avaliações digitais da biodiversidade

Abstract speciesLink is a large-scale biodiversity information portal that exists thanks to a broad collaborative network of people and institutions. CRIA's involvement with the scientific community of Brazil and other countries is responsible for the significant results achieved, currently reaching more than 15 million primary biodiversity data records, 95% of which are associated with preserved specimens and about 25% with high-quality digital images. The network provides data on over 200,000 species, of which over 110,000 occur in Brazil. This article describes thematic networks within speciesLink, as well as some of the most useful tools developed. The importance and contributions of speciesLink are outlined, as are concerns about securing stable budgetary support for such biodiversity data e-infrastructures. Here we review the value of speciesLink as a major source of biodiversity information for research, education, informed decision-making, policy development, and bioeconomy.

Resumo speciesLink é um portal de informações em larga escala sobre biodiversidade, que existe graças a uma ampla rede colaborativa de pessoas e instituições. O envolvimento do CRIA com a comunidade científica do Brasil e de outros países é responsável pelos resultados expressivos alcançados, atingindo atualmente mais de 15 milhões de registros de dados primários de biodiversidade, sendo 95% associados a espécimes preservados e cerca de 25% a imagens digitais de alta qualidade. A rede fornece dados sobre mais de 200.000 espécies, das quais mais de 110.000 ocorrem no Brasil. Este artigo descreve as redes temáticas do speciesLink, bem como algumas das ferramentas mais úteis desenvolvidas. A importância e as contribuições do speciesLink são destacadas, assim como as preocupações em garantir um apoio financeiro estável para e-infraestruturas de dados sobre biodiversidade. Aqui revisamos o valor do speciesLink como uma das principais fontes de informação sobre biodiversidade para pesquisa, educação, tomada de decisão, desenvolvimento de políticas e bioeconomia.

Mucorales from the semiarid of Pernambuco, Brazil

Nineteen taxa of Mucorales, belonging to Absidi, Apophysomyces, Cunninghamella, Fennellomyces, Lichtheimi, Mucor, Mycotypha, Rhizopus and Syncephalastrum were isolated from 36 composite soil samples in three semiarid areas in the State of Pernambuco (Triunfo, Cabrobó and Belém de São Francisco), Northeast Brazil, which are characterized by Caatinga vegetation. Triunfo is preserved, whereas Cabroró and Belém de São Francisco are experiencing low and severe desertification processes, respectively. Mucorales were isolated in Petri dishes in triplicate from 5 mg samples of soil placed on the surface of wheat germ agar plus chloramphenicol and Cercobin [Dimethyl 4,49-(103 phenylene) bis (3-thioallophanate)] medium. The plates were left on a bench at room temperature (28 ± 2 ºC) for 72 h of alternating dark and light periods. Absidia cylindrospora presented the highest amount of CFU/g of soil, followed by L. hyalospor, C. phaeospora and C. echinulata var. echinulata. The latter, and R. microsporus var. microsporus, presented the highest frequencies of occurrence. Soils from Triunfo showed higher diversity of Mucorales than the samples from the other areas, although without differing statistically in relation to species richness. The communities of Mucorales from the degraded areas were more similar, while that from the preserved area was quite different. Most of the identified specimens have been commonly isolated from soil in other Brazilian regions, which indicates that they are not endemic of the semiarid. Eleven taxa are registered for the first time in this ecosystem, while F. heterothallicus is reported for the first time in Brazil.

Diversity of leaf endophytic fungi in mangrove plants of Northeast Brazil

With the aim of increasing the knowledge about endophytic fungi, a group of microorganisms with high biotechnological potential and a valuable source of useful metabolites, a survey in leaves of mangrove plants (Avicennia schaueriana, Laguncularia racemosa, and Rhizophora mangle) was performed at the Itamaracá Island, PE, Brazil. Leaves were collected, during two seasons, dry and rainy, superficially sterilized and fragments maintained in Petri dishes with Potato dextrose agar (PDA) at 28º ± 2º C until isolation of the fungi. Fourty taxa were isolated: 25 species representing 19 genera and 15 morphotypes determined as Mycelia sterilia. Leaves of L. racemosa hosted the highest number of colony forming units (CFU) and taxa. Guignardia sp. and Colletotrichum gloeosporioides were the most frequently isolated, while Glomerella cingulata was the only species found in association with the three host plants. The proportional importance of each fungus differed among hosts. The similarity of fungi species between the two seasons reached only 4.2%, and that between the hosts was also low, with the maximum (A. schaueriana x L. racemosa) reaching 24.2%. Sphaerosporium, as well as Chloridium virescens var. virescens, Microsphaeropsis arundinis, Penicillium pinophilum, Periconia cambrensis, Phoma herbarum, P. diachenii, P. obscurans, Sordaria prolifica and Torula elisii are reported for the first time as endophytic in tropical regions.

Interactions between an arbuscular mycorrhizal fungus (Scutellospora heterogama) and the root-knot nematode (Meloidogyne incognita) on sweet passion fruit (Passiflora alata)

The effects of inoculation of sweet passion fruit plants with the arbuscular mycorrhizal (AM) fungus Scutellospora heterogama on the symptoms produced by Meloidogyne incognita race 1 and its reproduction were evaluated in two greenhouse experiments. In the 1st, the M. incognita (5000 eggs/plant) and S. heterogama (200 spores/plant) inoculations were simultaneous; in the 2nd, the nematodes were inoculated 120 days after the fungal inoculation. In both the experiments, 220 days after AM fungal inoculation, plant growth was stimulated by the fungus. In disinfested soil, control seedlings (without S. heterogama) were intolerant to parasitism of M. incognita, while the growth of mycorrhized seedlings was not affected. Sporulation of S. heterogama was negatively affected by the nematodes that did not impair the colonization. M. incognita did not affect mycorrhizal seedling growth. The establishment of mycorrhiza prior to the nematode infection contributed for the reduction of symptoms severity and reproduction of M. incognita in disinfested soil.

O efeito da inoculação com Scutellospora heterogama (200 esporos/planta) em relação aos sintomas e reprodução de Meloidogyne incognita raça 1 (5000 ovos/planta) foi avaliado em plantas de maracujazeiro doce em dois experimentos em casa de vegetação. No primeiro experimento, inoculações com nematóide e FMA foram simultâneas; no segundo, nematóides foram inoculados 120 dias após o estabelecimento da simbiose micorrízica. Após o 220º dia da inoculação do FMA o fungo estimulou o crescimento da planta nos dois experimentos. No solo desinfestado as mudas não inoculadas com S. heterogama mostraram intolerância ao parasitismo de M. incognita. A esporulação de S. heterogama foi negativamente afetada pela presença do nematóide. M. incognita não afetou o crescimento das mudas micorrizadas ou o desenvolvimento do FMA. O estabelecimento da micorriza antes do nematóide contribui para a redução da severidade dos sintomas e reprodução de M. incognita em solo desinfestado.

Production and infectivity of inoculum of arbuscular mycorrhizal fungi multiplied in a substrate supplemented with Tris-HCl buffer

The effect of adding Tris-HCl buffer on production and infectivity of AMF inoculum was investigated. Sporulation of Glomus etunicatum, Acaulospora longula and Gigaspora albida was improved in solution with buffer. The infectivity of G. etunicatum increased after storage, what suggests that the inoculum of this isolate is benefited by storage.

O efeito da adição do tampão Tris-HCl na produção e infectividade de inóculo foi investigado. A esporulação de Glomus etunicatum, Acaulospora longula e Gigaspora albida foi incrementada utilizando solução com tampão. A infectividade de G. etunicatum aumentou após estocagem, sugerindo que o inóculo deste isolado é beneficiado pelo armazenamento.

Morphological, cytological, and cultural aspects of Curvularia pallescens

Curvularia pallescens Boedijn (Hyphomycetes) is redescribed with the aid of scanning electron microscope, and the optimal cultural conditions for growing this fungus are discussed. Cytological analysis and nuclear condition, observed through the HCl-GIEMSA techique, showed vegetative and reproductive structures (hypha and conidia) formed by uni, bi, tri, and multinucleated segments. Cultures of C. pallescens in Complete Medium and in Potato Dextrose Agar varied on growth, on aspects of the border of the colonies and also on medium pigmentation. The Complete Medium and the temperature between 25-28degreeC were the most indicated for growth of C. pallescens.

Cellulolytic fungi isolated from an alluvial soil in a semi-arid area of the northeast of Brazil

Fungos foram isolados de um solo aluvial numa zona semi-árida (caatinga) do Estado de Pernambuco, em área sem vegetaçäo, anteriormente coberta por espécies de caatinga. O solo foi caracterizado como álico quartzo-arenoso com níveis relativamente altos de Al+++ e pH ácido. Durante a estaçäo seca a umidade do solo é muito baixa e a temperatura na superfície pode chegar a 70oC. Um dos métodos para determinar a retençäo de água pelo solo inclui o uso de um disco de papel de filtro colocado sobre um suporte, dentro de um recipiente plástico contendo solo úmido. Fungos do solo que crescem e destroem o papel de filtro foram isolados e identificados. A capacidade dessas espécies para atacar o papel indica a sua atividade celulolítica. Duas das espécies isoladas (Curvularia brachyspora e Penicillium pinophilum constituem novas referências para o Estado de Pernambuco